research-document

Research Execution Package (REP) Specification

Research Execution Package (REP) Specification

Version: 2.0
Status: Canonical

Purpose

The Research Execution Package (REP) is the canonical artifact produced at the completion of every research effort. It serves as:

  • Permanent scientific record
  • Executable handoff
  • Theory update
  • Knowledge transfer artifact
  • Synchronization point between autonomous research agents

Canonical Artifact Hierarchy

  1. Scientific Research Journal
  2. Research Execution Package (REP)
  3. Theory Registry
  4. Evidence Registry

All books, reports, websites, presentations, and training materials are generated from these artifacts.


Stable Identifiers

Artifact Prefix


Research Package RP- Journal Entry JR- Evidence EV- Hypothesis HY- Theory TH- Experiment EX- Decision Framework DF- Concept CN- Glossary GL-


Required Metadata

  • Identifier
  • Title
  • Research Area
  • Discipline
  • Author Agent
  • Version
  • Confidence
  • Completion
  • Priority
  • Related Projects
  • Related Documents
  • Supersedes / Superseded By
  • Tags
  • Keywords

Research State Snapshot

Every REP begins with:

  • Theory Version
  • Knowledge Base Version
  • Highest Confidence Areas
  • Lowest Confidence Areas
  • Largest Remaining Unknown
  • Active Research Streams
  • Recently Invalidated Ideas
  • Priority Changes

Mandatory Sections

  • Executive Summary
  • Original Objective
  • Scope
  • Repository Context
  • Current Understanding
  • Key Discoveries
  • Evidence Registry
  • Hypothesis Registry
  • Failed Assumptions
  • Open Questions
  • Recommended Next Research
  • Research Backlog
  • Suggested Specialized Research Agents
  • Parallel Research Opportunities
  • Risks
  • Cross-Discipline Opportunities
  • Knowledge Relationships
  • Repository Updates
  • Website Updates
  • AI Consumption Notes
  • Handoff Instructions
  • Research Journal
  • Appendix
  • Completion Checklist

Theory Impact Assessment

Every REP must document:

  • Affected Theory Records
  • Affected Engineering Principles
  • New Principle Candidates
  • Deprecated Principles
  • Confidence Changes
  • Predictions Created
  • Predictions Invalidated
  • Required Theory Registry Updates

Evidence Traceability

Every important claim should reference:

  • Evidence IDs
  • Hypothesis IDs
  • Theory IDs

Research Quality Metrics

Track:

  • Primary Sources
  • Independent Sources
  • Counterexamples Reviewed
  • Competing Viewpoints Reviewed
  • Hypotheses Tested
  • Failed Hypotheses
  • Research Completeness
  • Confidence Gain
  • Open Questions Reduced

Research Debt

Record:

  • Missing Evidence
  • Missing Experiments
  • Missing Disciplines
  • Weak Areas
  • Replication Needed
  • Tool Limitations
  • Assumptions Awaiting Evidence

Success Criteria

A completely different autonomous research agent should be able to:

  1. Reconstruct the investigation.
  2. Understand the current theory.
  3. Continue the research immediately.
  4. Produce the next REP without additional context.

If not, the package is incomplete.